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Parameter Redundancy and Identifiability Book Published

Diana Cole’s book Parameter Redundancy and Identifiability has been publish by Chapman and Hall/CRC

Book Synopsis

Statistical and mathematical models are defined by parameters that describe different characteristics of those models. Ideally it would be possible to find parameter estimates for every parameter in that model, but, in some cases, this is not possible. For example, two parameters that only ever appear in the model as a product could not be estimated individually; only the product can be estimated. Such a model is said to be parameter redundant, or the parameters are described as non-identifiable. This book explains why parameter redundancy and non-identifiability is a problem and the different methods that can be used for detection, including in a Bayesian context. Key features of this book:

  • Detailed discussion of the problems caused by parameter redundancy and non-identifiability
  • Explanation of the different general methods for detecting parameter redundancy and non-identifiability, including symbolic algebra and numerical methods
  • Chapter on Bayesian identifiability
  • Throughout illustrative examples are used to clearly demonstrate each problem and method. Maple and R code are available for these examples
  • More in-depth focus on the areas of discrete and continuous state-space models and ecological statistics, including methods that have been specifically developed for each of these areas

This book is designed to make parameter redundancy and non-identifiability accessible and understandable to a wide audience from masters and PhD students to researchers, from mathematicians and statisticians to practitioners using mathematical or statistical models.

Book website: https://www.routledge.com/Parameter-Redundancy-and-Identifiability/Cole/p/book/9781498720878

Code for book available at: https://www.kent.ac.uk/smsas/personal/djc24/parameterredundancy.html

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Guy Bronze Medal awarded to Rachel McCrea

Rachel has been awarded the 2020 Guy Bronze Medal by the Royal Statistical Society (RSS).

The Guy Medal in Bronze has been awarded for her innovative and novel work in statistical ecology, with particular reference to the development of goodness-of-fit tests and model selection strategies for complex ecological data. Important areas include (multi-state) capture-recapture-type models and integrated models. Notable publications include: the 2017 JRSSC paper ‘A new strategy for diagnostic model assessment in capture-recapture’, which identified a direct relationship between particular diagnostic tests and score tests; and the 2020 JRSSC paper ‘Diagnosing heterogeneity in transition probabilities in multistate capture-recapture data’, which developed new tests to identify unmodelled transition heterogeneity.

Professor Deborah Ashby, President of the Royal Statistical Society, said: “Dr McCrea has made a profound contribution to statistical ecology. The Society’s journals have published a number of noteworthy papers authored by Rachel, and her development of goodness-of-fit tests and model selection strategies has been particularly innovative.”

The medal will be presented to Rachel at the RSS Annual Conference in Bournemouth in September.

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Royal Statistical Society Barnett Award for Byron Morgan

Emeritus Professor of Statistics, Byron Morgan, has been awarded the Barnett Award by the Royal Statistical Society.

Being the leading authority on age-structured modelling of capture-recapture and ring-recovery data, his joint paper was the first to model how survival probabilities were influenced by weather covariates. Another influential paper on integrating mark-recapture-recovery and census data was foundational to the internationally-embraced sub-field of Integrated Population Modelling within statistical ecology. Most recently, he has been at the forefront of developing computationally-efficient methods for co-analysis of the UK Butterfly Monitoring Scheme with citizen science data sources, to give insights to biodiversity in urban versus rural settings. Byron Morgan was also one of the co-founders and first director of the National Centre for Statistical Ecology, a virtual Centre that links up statistical ecologists in the UK, and internationally.

Professor Deborah Ashby, President of the Royal Statistical Society, said: “Professor Morgan has had a great influence on the world of statistics and statistical ecology. His innovative work on computationally efficient methods for co-analysis of the UK Butterfly Monitoring Scheme has led to great insights into biodiversity and he had been a significant figure in creating better networks of statistical ecologists.”

Byron will be presented with the award at the Royal Statistical Society Annual Conference in September 2020 where he will also give a keynote presentation.

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New publication: Statistical Development of Animal Density Estimation Using Random Encounter Modelling

New publication in JABES: Statistical Development of Animal Density Estimation Using Random Encounter Modelling by Natoya Jourdain, Diana Cole, Martin Ridout and Marcus Rowcliffe.

Abstract:

Camera trapping is widely used in ecological studies to estimate animal density, although these studies are largely restricted to animals that can be identified to the individual level. The random encounter model, developed by Rowcliffe et al. (J Anal Ecol 45(4):1228–1236, 2008), estimates animal density from camera-trap data without the need to identify animals. Although the REM can provide reliable density estimates, it lacks the potential to account for the multiple sources of variance in the modelling process. The density estimator in REM is a ratio, and since the variance of a ratio estimator is intractable, we examine and compare the finite sample performance of many approaches for obtaining confidence intervals via simulation studies. We also propose an integrated random encounter model as a parametric alternative, which is flexible and can incorporate covariates and random effects. A data example from Whipsnade Wild Animal Park, Bedfordshire, south England, is used to demonstrate the application of these methods.

 

 

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Conferences/Meetings/Workshops

“eDNA: Challenges and Opportunities”; RSS meeting on the 7th of May 2020

Environmental DNA (eDNA) is an increasingly popular survey tool for monitoring species distribution. eDNA surveys have been used with a wide variety of species in different landscapes and there is growing evidence that they suffer from lower observation error than existing methods relying on direct observation of the target species.

From detecting single species using quantitative polymerase chain reaction  (qPCR), to studying whole communities using metabarcoding, eDNA is showing great promise in helping us understand species distributions and community compositions.

However, we are yet to fully understand the properties of eDNA, and hence are only beginning to appreciate the opportunities that eDNA surveys bring or the challenges that we need to overcome in the field, in the lab or in implementing eDNA surveys into policy.

This meeting brings together researchers who are leading in the development of new statistical methods for analysing eDNA data, in evaluating the use of eDNA surveys with different species and landscapes, or in embedding eDNA techniques into national or international policy.

Speakers and talks

  • 10.15-11  Kerry Walsh, Environment Agency: “Challenges and opportunities: A regulator’s perspective.”
  • 11-11.30 break and refreshments
  • 11.30-12.15  Naomi Ewald, FreshWater Habitats Trust: “Analysis of eDNA data to inform conservation priorities: case studies of long term species monitoring and short term before-after surveys.”
  • 12.15-13 Francesco Ficetola, University of Milan:  “Environmental DNA to track long-term changes of mountain ecosystem.”
  • 13-14 lunch
  • 14-14.45 Jim Griffin, University College London: “Modelling environmental DNA data; Bayesian variable selection accounting for false positive and false negative errors.”
  • 14.45-15.30
  • Doug Yu, University of East Anglia: “Managing wildlife with eDNA data: salmon, leeches, insects, and forests.”
  • 15.30-16.00 Discussion

The meeting, organised by the Environmental Statistics Section and the Emerging Applications Section of the Royal Statistical Society (RSS) will take place on the 7th of May 2020 at the RSS headquarters (12 Errol St, London EC1Y 8LX).

Follow this link to register for the event.

If you have any questions email e.matechou@kent.ac.uk.

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